Event:- General Topic: NONMEM and PsN workflows in R using rspeaksnonmem
- YouTube Link: https://www.youtube.com/watch?v=VFdGnWrRXw8- Presenter(s): MikeKSmith
- Dates: Wednesday 12 April 2017. Suggest 3pm UK, 4pm CET, 10am EST, 8am PST
- Background Resources for the Audience:
An R package called "rspeaksnonmem" is in development that allows the user to develop workflows running NONMEM and PsN functions from within R and to update NONMEM control stream components and write these out for execution from within R. It facilitates writing reproducible workflows based on NONMEM and PsN functionality. rspeaksnonmem calls on the functionality of the package RNMImport to read and parse the control stream and to read in the outputs from NONMEM. rspeaksnonmem breaks the NONMEM control stream into components associated with the data, parameters, model and tasks so that it is transparent to the user exactly what aspects of the model have changed and it allows some modularity of model definition.
Event: - General Topic: NONMEM and PsN workflows in R using rspeaksnonmem - YouTube Link: https://www.youtube.com/watch?v=VFdGnWrRXw8 - Presenter(s): MikeKSmith - Dates: Wednesday 12 April 2017. Suggest 3pm UK, 4pm CET, 10am EST, 8am PST - Background Resources for the Audience: An R package called "rspeaksnonmem" is in development that allows the user to develop workflows running NONMEM and PsN functions from within R and to update NONMEM control stream components and write these out for execution from within R. It facilitates writing reproducible workflows based on NONMEM and PsN functionality. rspeaksnonmem calls on the functionality of the package RNMImport to read and parse the control stream and to read in the outputs from NONMEM. rspeaksnonmem breaks the NONMEM control stream into components associated with the data, parameters, model and tasks so that it is transparent to the user exactly what aspects of the model have changed and it allows some modularity of model definition.
The code in development is hosted on Github (https://github.com/MikeKSmith/rspeaksnonmem). Vignettes have been written to illustrate how to use various aspects of rspeaksnonmem. https://github.com/MikeKSmith/rspeaksnonmem/tree/master/vignettes