isovic / graphmap

GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:
https://github.com/lbcb-sci/graphmap2
MIT License
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ascii to 2 bit encoding #103

Open harisankarsadasivan opened 5 years ago

harisankarsadasivan commented 5 years ago

Have been using Graphmap for my course project and have observed that the function "ConvertDataFormat" has an option to convert ascii index to a 2bit index and saw your test1.h file in codebase/gindex/test_src/.

Is there a reason why you haven't succeeded in including this change to the final version of Graphmap? Could you provide more hindsight? #