isovic / graphmap

GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:

https://github.com/lbcb-sci/graphmap2

MIT License

178 stars 44 forks source link

installation on i386? #35

Closed rahimrajwani closed 7 years ago

rahimrajwani commented 7 years ago

My compilation gets terminated with : /usr/include/zlib.h:34:19: fatal error: zconf.h: No such file or directory

include "zconf.h"

My guess is it is because I am compiling on i386 system.

Do you have any advice to fix this?

Thanks in advance.

andreas-wilm commented 7 years ago

Hi,

If zlib.h is there zconf.h should be there as well. Is this a very old system you're on? What's the zlib-dev version? You might want to check http://stackoverflow.com/questions/35308535/having-errors-when-trying-to-compile-these-files-zconf-missing

Andreas On 3 Sep 2016 17:33, "rahimrajwani" notifications@github.com wrote:

My compilation gets terminated with : /usr/include/zlib.h:34:19: fatal error: zconf.h: No such file or directory

include "zconf.h"

My guess is it is because I am compiling on i386 system.

Do you have any advice to fix this?

Thanks in advance.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/isovic/graphmap/issues/35, or mute the thread https://github.com/notifications/unsubscribe-auth/ABC5CbvJ2JQk3aYcln01t_tsYA4TvrrGks5qmT7xgaJpZM4J0RCP .

isovic commented 7 years ago

Hi, Did you manage to get it working? In any case, GraphMap is designed for 64-bit platforms and we never tested it on a 32-bit one, so I would advise to try switching to a compatible system. Best regards, Ivan.

rahimrajwani commented 7 years ago

Hi Ivan,

Thanks for your msg.

No, I couldn't get it working so I gave up on it. At the moment, I only have access to this 32-bit system. But you are right it would be easier if shift to a 64-bit system.

Many thanks.

On Fri, Oct 7, 2016 at 8:46 PM, Ivan Sovic notifications@github.com wrote:

Hi, Did you manage to get it working? In any case, GraphMap is designed for 64-bit platforms and we never tested it on a 32-bit one, so I would advise to try switching to a compatible system. Best regards, Ivan.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/isovic/graphmap/issues/35#issuecomment-252243073, or mute the thread https://github.com/notifications/unsubscribe-auth/ASbuOfADfLiLy4bC2mlvJLFn1TZemrEmks5qxj9AgaJpZM4J0RCP .