ERROR: Unknown parameter '-w'.

[evolgenomology]

Hi,

when trying to run the program like this bin/Linux-x64/graphmap align -x illumina -r /data1/Xenoturbella/redundans/run7-j3-i3/PacBio_scaffolder_results_l7/PacBio_l7.run7-j3-i3.scaffolds.fna.fa -d /data1/Xenoturbella/xenoturbella.TSLR.fastq -o /data1/Xenoturbella/redundans/run7-j3-i3/PacBio_scaffolder_results_l7/xenoturbella.TSLR.graphmap.alignments.sam

I get ERROR: Unknown parameter '-w'..

But there is no "w".

Best

Philipp

[isovic]

Hi Philipp, thanks for reporting this! The issue should now be fixed, try git pull; make modules; make. Best regards, Ivan.

[evolgenomology]

Thanks! Sent with SolMail App--------- Original Message --------- From: Ivan Sovic To: isovic/graphmap Date: Wed Oct 12 12:06:18 GMT+02:00 2016 Subject: Re: [isovic/graphmap] ERROR: Unknown parameter '-w'. (#38)

Hi Philipp, thanks for reporting this! The issue should now be fixed, try git pull; make modules; make. Best regards, Ivan.

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