GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:
I have an assembly with one chromosome and three large plasmids.
Will the "-C" option still make sense? Does GraphMap assume that every one of the four contigs is circular?
Or does it just work if I have one contig?
I have an assembly with one chromosome and three large plasmids. Will the "-C" option still make sense? Does GraphMap assume that every one of the four contigs is circular? Or does it just work if I have one contig?