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isovic / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116 Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:
https://github.com/lbcb-sci/racon
MIT License
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Are there any methods to save the difference between the input and output sequences? #105

Open ilnamkang opened 5 years ago

ilnamkang commented 5 years ago

Hello,

I'd like to save the difference between the input and output sequences (i.e. the changes made by Racon) as a file. Are there any command-line options for this?

Thanks.

rvaser commented 5 years ago

Hi, unfortunately no. You could try this: https://github.com/isovic/racon/issues/9#issuecomment-275067339

Best regards, Robert