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isovic / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116 Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:
https://github.com/lbcb-sci/racon
MIT License
268 stars 48 forks source link

CR in log output #120

Closed ptrebert closed 5 years ago

ptrebert commented 5 years ago

Hi, I executed Racon v1.3.2 (see my comment in #119) and sent stderr to a log file. I noticed that the series of aligned overlap xyz messages is not separated by \n, i.e.,

racon_cr

Running tr '\r' '\n' on the file fixes that, but it would be more convenient if the messages were separated by \n. Thanks. Best, Peter

rvaser commented 5 years ago

Hi Peter, the newest version has a much smaller log with a progress bar. Although, it is still using \r for a prettier console log and I am not keen on changing that.

Best regards, Robert

ptrebert commented 5 years ago

Any timeline for the release of this new version?

rvaser commented 5 years ago

For now you can just download the latest commit directly from github. I'll try to make a new release once I refactor some of the submodules racon is using (soon I hope :/).

ptrebert commented 5 years ago

Allright, thanks for the info.

rvaser commented 5 years ago

@ptrebert v1.3.3 has been released.

ptrebert commented 5 years ago

@rvaser Awesome, thanks for the update!