Closed michieitel closed 5 years ago
Hi Michael,
I think that each batch is around 200MB, the more batches the faster it will run. Just divide your GPU memory in MB with 200 and round down. For further speed-up, you can use the option -b
which might have a tiny bit of accuracy loss.
Best regards, Robert
I see! Thanks for this information!
Any guess when you manage to implement short read polishing with cuda? That would be amazing!!
Best Michael
You can ask the peeps from Nvidia @ https://github.com/clara-genomics/ClaraGenomicsAnalysis :)
Best regards, Robert
Ah I see ;-)
Hi!
Any recommendations on how to use the cuda options?
How can I identify suitable settings for my GPU?
thanks Michael