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isovic / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116 Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:
https://github.com/lbcb-sci/racon
MIT License
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Error: unequal lengths in sequence and overlap file for sequence #80

Closed chenshixuan closed 6 years ago

chenshixuan commented 6 years ago

Hi， Fist, I use Minimap && Miniasm to assebly work with the raw nanopore reads, here I had a assembly-result . Then I used Canu to corret and trim the nanopore raw data,then transfer the trimed fasta to fastq format. When I used the fastq format trimed reads to polish the assembly-result, The error message is"error: unequal lengths in sequence and overlap file for sequence ". How to solve the problem ? Could you give me some suggestions? Thank you very much. Best, Shixuan Chen

chenshixuan commented 6 years ago

Hi， I have solved the problem ，Just make the reads Id Uniq will be done,Thank you .

rvaser commented 6 years ago

Hello, is it still not working or did you reopen this issue by accident?

Best regards, Robert