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isugifNF
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GATK-flow
Nextflow implementation of the GATK HaplotypeCaller pipeline
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Unset conflicting Singularity environment variables
#17
j23414
opened
3 months ago
1
draft: SnpEff Variant Annotation
#16
j23414
opened
8 months ago
1
Add markduplicates to gatk dna pipeline
#15
j23414
closed
9 months ago
2
Add MarkDuplicates to GATK DNA pipeline
#14
j23414
closed
9 months ago
8
Add snpEff
#13
vsatheesh
opened
9 months ago
0
Remove invariant section from RNAseq (#11)
#12
j23414
closed
9 months ago
0
Remove invariant portion of the RNAseq analysis
#11
j23414
closed
9 months ago
0
Add gatk haplotype params
#10
j23414
closed
9 months ago
0
Update help statement
#9
j23414
closed
9 months ago
0
Feat/star aligner
#8
j23414
closed
10 months ago
0
reformat dsl2 code
#7
j23414
closed
1 year ago
0
Update to gatk
#6
j23414
closed
3 years ago
0
fix: picard linking error on Ceres HPC
#5
j23414
closed
3 years ago
0
3 feb 2021 update
#4
j23414
closed
3 years ago
0
fix: sed running out of mem for large files
#3
j23414
closed
3 years ago
0
fix: singularity picard option conflict
#2
j23414
closed
3 years ago
0
cleanup extra variable definition
#1
j23414
closed
3 years ago
0