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isugifNF / polishCLR

A nextflow pipeline for polishing CLR assemblies
https://isugifnf.github.io/polishCLR/
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Temporary method of splitting pipeline #19

Closed j23414 closed 2 years ago

j23414 commented 2 years ago

By default, will only run first arrow polish--steptwo false. If parameter --steptwo true then only run rest of pipeline (optional arrow, freebayes, freebayes)