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isugifNF / polishCLR

A nextflow pipeline for polishing CLR assemblies
https://isugifnf.github.io/polishCLR/
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Bring in QUAST? #42

Closed Astahlke closed 1 year ago

Astahlke commented 1 year ago

Reviewer's request: It would be good to have some extra metrics at least for the final version of the assembly (e.g. misassemblies estimated with FRC_Align/QUAST)

Add this to envirnoment.yml

Astahlke commented 1 year ago

Not easy to bring in, encourage users to use whatever evaluation method they like. We provide QV and stats.sh