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isugifNF
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polishCLR
A nextflow pipeline for polishing CLR assemblies
https://isugifnf.github.io/polishCLR/
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update subworkflows
#15
j23414
closed
3 years ago
0
Subworkflows
#14
Astahlke
closed
3 years ago
0
Incorportate assembled mt genome
#13
Astahlke
closed
3 years ago
1
further thinking about threading, now takes the max of nprocs or threads, which will get around clusters which are setup to only show one cpu
#12
molikd
closed
2 years ago
2
Using parallel to speed up grep
#11
molikd
closed
2 years ago
2
thoughts on nproc logic
#10
molikd
closed
3 years ago
1
bbsuite stat
#9
j23414
closed
3 years ago
1
Add --meryldb parameter
#8
j23414
closed
2 years ago
2
Require --species
#7
j23414
closed
2 years ago
1
auto detect bz extension
#6
j23414
closed
3 years ago
1
force an error when --profile is used instead of -profile
#5
j23414
closed
3 years ago
1
sge executor
#4
j23414
closed
3 years ago
3
Refactor
#3
j23414
closed
3 years ago
0
polishCLR pipeline
#2
j23414
closed
1 year ago
5
add merfin between arrow and freebayes
#1
j23414
closed
3 years ago
1
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