itchyshin / castration_meta-analysis

Castration meta-analysis
https://itchyshin.github.io/castration_meta-analysis/
MIT License
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Paper draft #14

Closed Mike-Garratt closed 2 years ago

Mike-Garratt commented 3 years ago

castration meta analysis_paper first draft_141021.docx

Hi @itchyshin, @mlagisz and @Jeff-Lemaitre

I have hopefully attached a first draft of the sterilization meta-analysis paper here. I will send an email as well but I like the idea of recording early drafts here too!

Cheers

Mike

itchyshin commented 3 years ago

@Mike-Garratt - thank you this looks fantastic. @mlagisz and I will read it asap.

One thing we noticed and this went through the crack earlier is that you only use one database. It is getting increasing difficult to get this pass with just one database with much evidence suggests - we need at least two (the overlap between Scopus & WoS can be as low as 40% in some cases - using extractly the same key strings).

@mlagisz and I can help you solve this quickly by doing the parallel search with Web of Science. Also, Losia think we can include the grey literature search (which is increasingly asked).

As your question is very focused, my guess is that we get 1 or 2 more papers and then, we can quickly add this to the analyses.

We will need help for screening - maybe Christine can do this - I think the web of scinece search would procude extra several hundreds of papers to screen but that is just a few days of work and we will have much a better chance to convincing reviewers.

We can deal with the grey literature - this will be screening theses - but Loisa and I can do this quickly if you like.

Does this sound like a plan? I am very much aware that your baby is due soon but if we are going for Nature Comm etc, we certainly need to do what I suggest above - and I think beucase of your focused question, we only get a few papers or more - which may be good as some moderators are really underpowered.

Best

Shinichi

Mike-Garratt commented 3 years ago

Hi @itchyshin and @mlagisz

Yep, I am happy to do the screening and if we pick up any additional papers then great. If the paper gets lots of press interest, which it might, I'll like to make sure everything is tight and includes all possible data. If there is only several 100 then I should be able to do it with Christine. One of the problems we had in the first search is getting rid of duplicates in Rayyan - we tried to use the remove duplicates function in Rayyan but we still had 100s that we had to skip past when doing the search.

Is there any easy way reduce the items that come up with the WOS search so that it only shows the new ones that weren't detected with Scopus? If you guys have a trick with that then it would make things much easier. And yes the grey literature search would be great.

Thanks for all your help,

Mike

itchyshin commented 2 years ago

@Mike-Garratt - it would be good to catch up? Now the analysis is updated - apart from redoing a couple of figures. So I should read your MS. Do you have an updated the MS with others' comments incorporated. Or should I read the one in this issue. Happy to catch up this week or next - now I have remembered all these analyses etc so it would be good to push this to finish off. Many thanks for your patience.

Mike-Garratt commented 2 years ago

Hi, Mike

How about my 11.30 am tomorrow? Please send me a Zoom link - look forward to catching up

Best

Shinichi


Professor Shinichi Nakagawa, PhD, FRSN Evolution & Ecology Research Centre, EERC Room 5102, Biological Sciences Building (E26) School of Biological, Earth and Environmental Sciences, BEES The University of New South Wales Randwick NSW 2052, Sydney, Australia Mobile: 0422 655 854 Office: 0293 859 138 Website: http://www.i-deel.org/

On Wed, Apr 20, 2022 at 6:43 AM Mike Garratt @.***> wrote:

Hi Shinichi,

Thanks so much for redoing the analysis!

I haven't updated the manuscript since the last set of comments because we were redoing all the analysis. However, now is a good time for me so should be able to work on this paper a lot of very the next couple of weeks.

Yep, would be good to chat. Im completely free over the next couple of days in normal work time if you have some time? Between 7am-1pm Sydney if that works. Next week is also good.

Cheers Mike


From: Shinichi Nakagawa @.> Sent: Tuesday, April 19, 2022 2:30 PM To: itchyshin/castration_meta-analysis < @.> Cc: Mike Garratt @.>; Mention < @.> Subject: Re: [itchyshin/castration_meta-analysis] Paper draft (#14)

@Mike-Garratt https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FMike-Garratt&data=04%7C01%7CMike.Garratt%40otago.ac.nz%7C3a5617d7689148ce1cd308da21aca373%7C0225efc578fe4928b1579ef24809e9ba%7C0%7C0%7C637859322615748843%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=6CZQw2BLZBi1KtiVz9Y5bObX0317zjC1U9rS52AUvSU%3D&reserved=0

  • it would be good to catch up? Now the analysis is updated - apart from redoing a couple of figures. So I should read your MS. Do you have an updated the MS with others' comments incorporated. Or should I read the one in this issue. Happy to catch up this week or next - now I have remembered all these analyses etc so it would be good to push this to finish off. Many thanks for your patience.

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itchyshin commented 2 years ago

Hi, @Mike-Garratt

How about my 11.30 am tomorrow? Please send me a Zoom link - look forward to catching up

Best

Shinichi

itchyshin commented 2 years ago

@Mike-Garratt - I have sent an invite for a Zoom meeting tomorrow

Mike-Garratt commented 2 years ago

Awesome thanks Shinichi. Catch you tomorrow,

Mike


From: Shinichi Nakagawa @.> Sent: Wednesday, April 20, 2022 6:04 PM To: itchyshin/castration_meta-analysis @.> Cc: Mike Garratt @.>; Mention @.> Subject: Re: [itchyshin/castration_meta-analysis] Paper draft (#14)

@Mike-Garratthttps://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FMike-Garratt&data=05%7C01%7CMike.Garratt%40otago.ac.nz%7Cf81623bfba63480b5ef908da22939780%7C0225efc578fe4928b1579ef24809e9ba%7C0%7C0%7C637860314546168520%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=2FklHYCNBxSSEDWCDfF0i1NVsBGil8PsRAKTlmNAdZo%3D&reserved=0 - I have sent an invite for a Zoom meeting tomorrow

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itchyshin commented 2 years ago

My comments to the MS - @Mike-Garratt castration.meta.analysis_paper.first.draft_141021_SN.docx

Several things to talk about at our meeting

Mike-Garratt commented 2 years ago

Hi @itchyshin, sorry I didnt get chance to look at the paper this week but I'll get working on it over the next few days to week. Hope all is well, Mike

itchyshin commented 2 years ago

@Mike-Garratt - no worries - delays on my side too - have a good weekend

Mike-Garratt commented 2 years ago

Hi Shinichi,

Thanks so much for redoing the analysis!

I haven't updated the manuscript since the last set of comments because we were redoing all the analysis. However, now is a good time for me so should be able to work on this paper a lot of very the next couple of weeks.

Yep, would be good to chat. Im completely free over the next couple of days in normal work time if you have some time? Between 7am-1pm Sydney if that works. Next week is also good.

Cheers Mike


From: Shinichi Nakagawa @.> Sent: Tuesday, April 19, 2022 2:30 PM To: itchyshin/castration_meta-analysis @.> Cc: Mike Garratt @.>; Mention @.> Subject: Re: [itchyshin/castration_meta-analysis] Paper draft (#14)

@Mike-Garratthttps://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FMike-Garratt&data=04%7C01%7CMike.Garratt%40otago.ac.nz%7C3a5617d7689148ce1cd308da21aca373%7C0225efc578fe4928b1579ef24809e9ba%7C0%7C0%7C637859322615748843%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=6CZQw2BLZBi1KtiVz9Y5bObX0317zjC1U9rS52AUvSU%3D&reserved=0 - it would be good to catch up? Now the analysis is updated - apart from redoing a couple of figures. So I should read your MS. Do you have an updated the MS with others' comments incorporated. Or should I read the one in this issue. Happy to catch up this week or next - now I have remembered all these analyses etc so it would be good to push this to finish off. Many thanks for your patience.

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