Update QC script to work on all `sci` datasets

ivadomed / model_seg_sci

Deep-learning based segmentation of the spinal cord and intramedually lesions in traumatic and non-traumatic SCI

MIT License

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Closed valosekj closed 9 months ago

valosekj commented 9 months ago

to be compatible with all datasets (sci-zurich, sci-colorado, sci-paris)
to generate single slice sagittal spinal cord QC (to check FOV coverage (C/Th/L))

QCs saved to ~/duke/projects/ml_sci_seg/paper/QCs