The draw method of the HaplotypeGraph class is currently broken.
We need a new method that properly represents the haplotypes and the individuals to whom those haplotypes belong. Issues with current representation:
Currently, nodes are laid out to minimize crossings, which leads to separating haplotypes from the same individual. Therefore, we need to figure out a layout that doesn't do that.
The method should accommodate various types of HaplotypeGraphs (e.g. autosomal, mitochondrial, etc.).
Ideally, this method should be moved to the Drawing script.
The
drawmethod of theHaplotypeGraphclass is currently broken. We need a new method that properly represents the haplotypes and the individuals to whom those haplotypes belong. Issues with current representation:HaplotypeGraphs(e.g. autosomal, mitochondrial, etc.).Drawingscript.