Week 8 Assignment - Githubissues

izabella-mastroianni / qbb2024-answers

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Week 8 Assignment #13

Open msiqi opened 1 week ago

msiqi commented 1 week ago

Part 1: R Script (6.5 pt)

Evaluation:

Loading data: 1/1 pt
Exploring data: 2.5/2.5 pt
Identifying marker genes: 3/3 pt

Score: 6.5/6.5 pt

Part 2: Plots (3.5 pt)

Evalutation:

Broad annotation vs % mitochondrial reads: 0.5/0.5 pt should generate violin plot using plotColData, but this is fine
Epithelial cells UMAP colored by annotation: 0.5/1 pt color epithelial cell umap by annotation, not broad_annotation
Expression plot of top marker gene in epithelial cell according to annotation: 1/1 pt
Expression plot of top six marker genes in precursor cells according to annotation: 1/1pt

Score: 3/3.5 pt

Total score: 9.5/10 pt

Great work!