Need help running the code.

[eros273]

Hello, I'm a students trying to create a graph similar to figure 3 of the GenGraph paper. I've been trying to get the code to run for more that a week and is always error after errors the latest one is this:

FileNotFoundError: [WinError 2] The system cannot find the file specified

full code

C:\Users\eros1\anaconda3\Lib\site-packages\GenGraph>python ./gengraphTool.py make_genome_graph --seq_file C:\Users\eros1\OneDrive\documents\Summer2022_Genome\E.coli_tab.txt --out_file_name test

Conducting progressiveMauve ({'seq0': 'K-12', 'seq1': 'Nissle-1917', 'seq2': 'O157:H7'}, {'K-12': 'C:/Users/eros1/OneDrive/Documents/Summer2022_Genome/E. Coli k-12.fasta', 'Nissle-1917': 'C:/Users/eros1/OneDrive/Documents/Summer2022_Genome/E. Coli Nissle 1917.fasta', 'O157:H7': 'C:/Users/eros1/OneDrive/Documents/Summer2022_Genome/E. Coli O157H7.fasta'}, ['C:/Users/eros1/OneDrive/Documents/Summer2022_Genome/E. Coli k-12.fasta', 'C:/Users/eros1/OneDrive/Documents/Summer2022_Genome/E. Coli Nissle 1917.fasta', 'C:/Users/eros1/OneDrive/Documents/Summer2022_Genome/E. Coli O157H7.fasta'], {'K-12': 'NA', 'Nissle-1917': 'NA', 'O157:H7': 'NA'})

Traceback (most recent call last): File "./gengraphTool.py", line 87, in progressiveMauve_alignment(parsed_input_dict[2], args.out_file_name) File "C:\Users\eros1\anaconda3\Lib\site-packages\GenGraph\gengraph.py", line 1949, in progressiveMauve_alignment return call(progressiveMauve_call, stdout=open(os.devnull, 'wb')) File "C:\Users\eros1\anaconda3\lib\subprocess.py", line 340, in call with Popen(*popenargs, **kwargs) as p: File "C:\Users\eros1\anaconda3\lib\subprocess.py", line 858, in init self._execute_child(args, executable, preexec_fn, close_fds, File "C:\Users\eros1\anaconda3\lib\subprocess.py", line 1311, in _execute_child hp, ht, pid, tid = _winapi.CreateProcess(executable, args, FileNotFoundError: [WinError 2] The system cannot find the file specified