search

james-cole / brainageR

Software for generating a brain-predicted age value, using Gaussian Processes regression, implemented in R
GNU Lesser General Public License v3.0
76 stars 27 forks source link

How do I deal with some files？ #11

Open zhixiai opened 1 year ago

zhixiai commented 1 year ago

I want to process a batch of data, but it seems that Docker only provides a way to process a .nii file

james-cole commented 1 year ago

Hi Zhixiai,

Thanks for your message. Indeed, brainageR is designed only to work on one image, this is to enable batch processing on HPC clusters and similar parallel systems, so that you can process many images at once. This speeds up massively compared to running a list of images in serial.

So to process a batch of N images, you simply need to launch the docker N times.

Hope that helps,

Best wishes, James

From: zhixiai @.> Date: Thursday, 2 November 2023 at 3:41 am To: james-cole/brainageR @.> Cc: Subscribed @.***> Subject: [james-cole/brainageR] How do I deal with some files？ (Issue #11)

⚠ Caution: External sender

I want to process a batch of data, but it seems that Docker only provides a way to process a .nii file

— Reply to this email directly, view it on GitHubhttps://github.com/james-cole/brainageR/issues/11, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ACCUV6HRQUQQLZ5ZWQNMW3DYCMI7DAVCNFSM6AAAAAA62HQGMCVHI2DSMVQWIX3LMV43ASLTON2WKOZRHE3TGNBUG42TOOA. You are receiving this because you are subscribed to this thread.Message ID: @.***>