Masurca requires the library insert size and stddev, but these are obtained through read alignment vs the reference. If no reference is provided these values are therefore not defined. Need to require insert size/stddev to be provided from command line if not reference provided
jamesabbott
commented
7 years ago
Masurca requires the library insert size and stddev, but these are obtained through read alignment vs the reference. If no reference is provided these values are therefore not defined. Need to require insert size/stddev to be provided from command line if not reference provided