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jamescasbon / PyVCF

A Variant Call Format reader for Python.
http://pyvcf.readthedocs.org/en/latest/index.html
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VCF reader.fetch #330

Open RNJ1993 opened 3 years ago

RNJ1993 commented 3 years ago

Hi,

After running vcf_reader.fetch() I am getting the following error:

ValueError: start (22296796) >= end (22287220)

I have checked the gene position file I am using for points where start > end. However, there is no point in my gene position file where the start >= end.

Any suggestions?

thanks