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janelia-cellmap / cellmap-nuclei

Generating nucleus segmentations for FIB-SEM datasets of cells and tissues
BSD 3-Clause "New" or "Revised" License
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jrc_fly-mb-z0419-20 #12

Open jonesa3 opened 3 weeks ago

aemmav commented 2 weeks ago

s4 stack is too big, can you save s5 slices @jonesa3

avweigel commented 2 weeks ago

check if the s5 is closer to the 1gb or less size... if not, maybe go even lower 🤞

jonesa3 commented 2 weeks ago

fixed; used s5 (<1gb)

jonesa3 commented 20 hours ago

masks relabeled