janelia-cellmap / cellmap-nuclei

Generating nucleus segmentations for FIB-SEM datasets of cells and tissues
BSD 3-Clause "New" or "Revised" License
1 stars 0 forks source link

jrc_hela-21 #13

Open jonesa3 opened 4 months ago

jonesa3 commented 4 months ago

used s3 (64nm seemed too low for this dataset)

jonesa3 commented 4 months ago

proofread tif found here: /avetissiane/tiff_slices/jrc_hela-21/s3_amira_proofread.tif

yuriyzubov commented 4 months ago

/avetissiane/tiff_slices/jrc_hela-21/s3_amira_proofread.zarr

yuriyzubov commented 3 months ago

jrc_hela-21.zarr/recon-1/labels/inference/segmentations/nuc

rinva commented 3 months ago

Image

Thumbnail /cellmap/nrs/data/jrc_hela-21/thumbnail_nuc.jpg Ready for meshes

rinva commented 2 months ago

DOI created

https://doi.org/10.25378/janelia.26513023 https://figshare.com/s/e2fa89bb4fa0ae864417