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janelia-cellmap / cellmap-nuclei

Generating nucleus segmentations for FIB-SEM datasets of cells and tissues
BSD 3-Clause "New" or "Revised" License
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jrc_cos7-11 #3

Open jonesa3 opened 3 weeks ago

jonesa3 commented 3 weeks ago

exported s3 slices (128 nm seemed a bit too low for this dataset)

jonesa3 commented 2 weeks ago

skipping connected components (only five nucleus ids)

jonesa3 commented 2 weeks ago

proofread tif found here: /avetissiane/tiff_slices/jrc_cos7-11/s3_amira_proofread.tif

yuriyzubov commented 2 weeks ago

/avetissiane/tiff_slices/jrc_cos7-11/s3_amira_proofread.zarr