janelia-cellmap / cellmap-nuclei

Generating nucleus segmentations for FIB-SEM datasets of cells and tissues
BSD 3-Clause "New" or "Revised" License
1 stars 0 forks source link

jrc_sum159-1 #37

Open jonesa3 opened 3 months ago

jonesa3 commented 3 months ago

skipping connected components (single nucleus id)

jonesa3 commented 3 months ago

proofread tif found here: /avetissiane/tiff_slices/jrc_sum159-1/s4_amira_proofread.tif

yuriyzubov commented 3 months ago

/avetissiane/tiff_slices/jrc_sum159-1/s4_amira_proofread.zarr

yuriyzubov commented 2 months ago

jrc_sum159-1.zarr/recon-1/labels/inference/segmentations/nuc

rinva commented 2 months ago

Image

Thumbnail /cellmap/nrs/data/jrc_sum159-1/thumbnail_nuc.jpg Ready for meshes

rinva commented 1 month ago

DOI created https://doi.org/10.25378/janelia.26513248 https://figshare.com/s/0e82d2d24523382e5153