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jannisborn / covid19_ultrasound

Open source lung ultrasound (LUS) data collection initiative for COVID-19.
https://www.mdpi.com/2076-3417/11/2/672
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Add PULSE Lab Repository description folder #122

Closed lingyigt closed 7 months ago

lingyigt commented 7 months ago

This pull request introduces a new folder titled "PULSE Lab Repository" to the repository. This new folder includes a README.md file that gives a detailed description of the simulated dataset as well as ground truth labels for some of the POCUS datasets described in the paper “Detection of COVID-19 features in lung ultrasound images using deep neural networks.” Communications Medicine, 2024. https://www.nature.com/articles/s43856-024-00463-5.

The README.md file in the main directory was also updated to reflect this change.

Let me know if you have any questions or suggestions. Thanks!

Best, Lingyi

lingyigt commented 7 months ago

Thanks a lot for the PR @lingyigt looks great, only some small changes required before we can merge, see the comments!

Thanks for the comments!

jannisborn commented 7 months ago

Hi @lingyigt any update on this?

lingyigt commented 7 months ago

Thanks for following up. All suggested updates have been made except for the meta data table. Hopefully it will be done by this weekend. Thanks!

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lingyigt commented 7 months ago

Hi @lingyigt any update on this?

Hi @jannisborn , I've added one column at the end of the dataset_metadata.csv. Please check and let me know if anything else is needed. Thanks!

jannisborn commented 7 months ago

Great job, thanks a lot! At this point, I think we can delete the PULSE Lab Repository/POCUSdataset.png screenshot, right? You have the data listed in the README and highlighted in the .csv so no need to keep the image.

Then we can merge :)

lingyigt commented 7 months ago

Great job, thanks a lot! At this point, I think we can delete the PULSE Lab Repository/POCUSdataset.png screenshot, right? You have the data listed in the README and highlighted in the .csv so no need to keep the image.

Then we can merge :)

Thanks and my pleasure! I just deleted the 'PULSE Lab Repository/POCUSdataset.png' file. Let me know if anything else is needed. Thanks!