TopDom is a software tool to ideintify Topological Domains, which are basic builiding blocks of genome structrue. TopDom is computationally very efficient. Using detecting optimal polygon algorithm, TopDom detect topological domains in a linear time. As well as, this tool requires only a single parameter, which enable user to use easily.
Hello,
I get the following error while running TopDom: 'ret[i, "from.id"]:ret[i, "to.id"]':argument with NA/NaN value
And my matrix and bin coordinates do not have any NA values.
Best regards, Aleksandra