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jason-weirather / GSVA

A command-line interface and python module for R's GSVA bioconductor package
Apache License 2.0
13 stars 6 forks source link

Getting KeyError: 'member' #3

Closed Eshan-Agarwal closed 4 years ago

Eshan-Agarwal commented 4 years ago

pathways_df = gsva(expression_df,ifn_genes)

In above code I passed expression_df which is my genes expression data and genesets_df are containing data of 25 genes present in this expression data. Got member error can anyone explain me about this error and how to resolve it ?

Eshan-Agarwal commented 4 years ago

I changed column of my genestes_df to members which contain gene names but don't know what to do with name column which is also required column ?