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jasonkyuyim / se3_diffusion

Implementation for SE(3) diffusion model with application to protein backbone generation
https://arxiv.org/abs/2302.02277
MIT License
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Reproduce final results #42

Open ZichongWang opened 1 week ago

ZichongWang commented 1 week ago

Hi! Sorry to ask, but I find myself hard to find the final paper result of the experiment (novelty, diversity, novelty). In the paper they are measured by scRMSD and TM-score, how can I find the python script to transform scRMSD and TM-score to final results? Thank you!

jasonkyuyim commented 2 days ago

Sorry for the late reply.

Diversity measurement can be found here https://github.com/jasonkyuyim/se3_diffusion/issues/35 . scRMSD is included in the sc_results.csv file with every inference output. Novelty calculations can be found here https://github.com/microsoft/protein-frame-flow/issues/14 .