Unplaced sequence file stays empty

jasperlinthorst / reveal

Graph based multi genome aligner

MIT License

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Closed fbemm closed 6 years ago

fbemm commented 6 years ago

Hi Jasper,

I just realized that the unplaced.fasta that reveal finish creates stays empty. Also in cases like:

04/23/2018 11:45:32 AM 97.60% (117074457 out of 119950950) of the assembly was placed with respect to the reference.

3679/7391 contigs were placed.

Is that a known behavior? Using contig mode at the moment.

commit 2c92d1e5a166fcf7d055105ccbc21f4b69898915

jasperlinthorst commented 6 years ago

I don't really know why this happened, but it should be fixed again on the current master. Let me know if it works for you, Jasper

fbemm commented 6 years ago

Works! Thx, Felix