Closed jaclyn-taroni closed 3 years ago
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"Multiple approaches are required." (Alternative title suggestions are most welcome!)
How about "Using composite approaches can be a powerful strategy"?
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@jaclyn-taroni: would you like to address #128 in this PR, or should I merge this in as-is before you start working on #128 in a new PR?
So long as merging this doesn't "undo" any edits that happened on the Google Doc, I say go for it and I'll open up a new one later.
Sounds good. I will merge this in to reflect the "before google doc" version.. after that the google doc edits will be reflected in #129
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Purpose
Addresses #111.
In an earlier pull request, I moved the coverage of DeepProfile and MultiPLIER into their own section (currently) titled "Multiple approaches are required." (Alternative title suggestions are most welcome!)
The goal of this section is to emphasize that you are most likely not going to employ one of the approaches we cover in isolation; you're going to need multiple techniques "woven together." A secondary goal of this section is to unify the regularization, other data and knowledge, and representation learning sections. Transfer learning is covered in the section immediately preceding this one and the main point of difference I'm trying to make is how putting some constraints on the representation the model learns can be helpful.
Directions for reviewers
I would like to probably take another pass through this before it goes in, but figured we could collect comments in parallel!
Which areas should receive a particularly close look?
Manuscript checklist
Unless otherwise noted above, this PR will be considered ready for review when all four items have been checked.