I have begun working on coverage+genotype calls. Still a long way to go, but I want to get this change in because I moved some procedures around. I also introduced a new utility command in bin "info.py" which can query a snp from the db. This change is disruptive to get_variant_csv() if you've been using that output, though it was and still is only proof of concept, and there's only so far we can go with a csv file.
I have begun working on coverage+genotype calls. Still a long way to go, but I want to get this change in because I moved some procedures around. I also introduced a new utility command in bin "info.py" which can query a snp from the db. This change is disruptive to get_variant_csv() if you've been using that output, though it was and still is only proof of concept, and there's only so far we can go with a csv file.