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jazzdd86 / alpine-flask

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Unable to install folium #10

Open helicoder opened 5 years ago

helicoder commented 5 years ago

In either python2.7 or 3.5 builds running pip install pandas or folium results in many errors

jazzdd86 commented 5 years ago

Ok, did you check if there are any prereqs missing? Do you have an error log? I need to check, if that has anything to do with my image - need some time for that.

helicoder commented 5 years ago

I tried installing pandas and numpy but they didn't install either.

Here's the log:

root@docker-s-1vcpu-1gb-lon1-01:~# docker exec flaskapp /bin/bash -c "pip3 install folium" Collecting folium Downloading https://files.pythonhosted.org/packages/55/e2/7e523df8558b7f4b2ab4c62014fd378ccecce3fdc14c9928b272a88ae4cc/folium-0.7.0-py3-none-any.whl (85kB) Collecting requests (from folium) Downloading https://files.pythonhosted.org/packages/7d/e3/20f3d364d6c8e5d2353c72a67778eb189176f08e873c9900e10c0287b84b/requests-2.21.0-py2.py3-none-any.whl (57kB) Collecting branca>=0.3.0 (from folium) Downloading https://files.pythonhosted.org/packages/63/36/1c93318e9653f4e414a2e0c3b98fc898b4970e939afeedeee6075dd3b703/branca-0.3.1-py3-none-any.whl Collecting numpy (from folium) Downloading https://files.pythonhosted.org/packages/2b/26/07472b0de91851b6656cbc86e2f0d5d3a3128e7580f23295ef58b6862d6c/numpy-1.16.1.zip (5.1MB) Requirement already satisfied: jinja2 in /usr/lib/python3.6/site-packages (from folium) (2.10) Collecting six (from folium) Downloading https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl Collecting certifi>=2017.4.17 (from requests->folium) Downloading https://files.pythonhosted.org/packages/9f/e0/accfc1b56b57e9750eba272e24c4dddeac86852c2bebd1236674d7887e8a/certifi-2018.11.29-py2.py3-none-any.whl (154kB) Collecting chardet<3.1.0,>=3.0.2 (from requests->folium) Downloading https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl (133kB) Collecting urllib3<1.25,>=1.21.1 (from requests->folium) Downloading https://files.pythonhosted.org/packages/62/00/ee1d7de624db8ba7090d1226aebefab96a2c71cd5cfa7629d6ad3f61b79e/urllib3-1.24.1-py2.py3-none-any.whl (118kB) Collecting idna<2.9,>=2.5 (from requests->folium) Downloading https://files.pythonhosted.org/packages/14/2c/cd551d81dbe15200be1cf41cd03869a46fe7226e7450af7a6545bfc474c9/idna-2.8-py2.py3-none-any.whl (58kB) Requirement already satisfied: MarkupSafe>=0.23 in /usr/lib/python3.6/site-packages (from jinja2->folium) (1.1.0) Installing collected packages: certifi, chardet, urllib3, idna, requests, six, branca, numpy, folium Running setup.py install for numpy: started Running setup.py install for numpy: finished with status 'error' Complete output from command /usr/bin/python3.6 -u -c "import setuptools, tokenize;file='/tmp/pip-install-x49g_zjw/numpy/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /tmp/pip-record-knl237st/install-record.txt --single-version-externally-managed --compile: Running from numpy source directory.

Note: if you need reliable uninstall behavior, then install
with pip instead of using `setup.py install`:

  - `pip install .`       (from a git repo or downloaded source
                           release)
  - `pip install numpy`   (last NumPy release on PyPi)

blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
  libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

blis_info:
customize UnixCCompiler
  libraries blis not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

openblas_info:
customize UnixCCompiler
customize UnixCCompiler
  libraries openblas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
  libraries tatlas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

atlas_3_10_blas_info:
customize UnixCCompiler
  libraries satlas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
  libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

atlas_blas_info:
customize UnixCCompiler
  libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

accelerate_info:
  NOT AVAILABLE

/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/system_info.py:636: UserWarning:
    Atlas (http://math-atlas.sourceforge.net/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [atlas]) or by setting
    the ATLAS environment variable.
  self.calc_info()
blas_info:
customize UnixCCompiler
  libraries blas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/system_info.py:636: UserWarning:
    Blas (http://www.netlib.org/blas/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [blas]) or by setting
    the BLAS environment variable.
  self.calc_info()
blas_src_info:
  NOT AVAILABLE

/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/system_info.py:636: UserWarning:
    Blas (http://www.netlib.org/blas/) sources not found.
    Directories to search for the sources can be specified in the
    numpy/distutils/site.cfg file (section [blas_src]) or by setting
    the BLAS_SRC environment variable.
  self.calc_info()
  NOT AVAILABLE

/bin/sh: svnversion: not found
non-existing path in 'numpy/distutils': 'site.cfg'
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
  libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

openblas_lapack_info:
customize UnixCCompiler
customize UnixCCompiler
  libraries openblas not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

openblas_clapack_info:
customize UnixCCompiler
customize UnixCCompiler
  libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
  libraries tatlas,tatlas not found in /usr/local/lib
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
  libraries tatlas,tatlas not found in /usr/lib
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
  NOT AVAILABLE

atlas_3_10_info:
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
  libraries satlas,satlas not found in /usr/local/lib
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
  libraries satlas,satlas not found in /usr/lib
<class 'numpy.distutils.system_info.atlas_3_10_info'>
  NOT AVAILABLE

atlas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
  libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
  libraries ptf77blas,ptcblas,atlas not found in /usr/lib
<class 'numpy.distutils.system_info.atlas_threads_info'>
  NOT AVAILABLE

atlas_info:
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
  libraries f77blas,cblas,atlas not found in /usr/local/lib
customize UnixCCompiler
  libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
  libraries f77blas,cblas,atlas not found in /usr/lib
<class 'numpy.distutils.system_info.atlas_info'>
  NOT AVAILABLE

lapack_info:
customize UnixCCompiler
  libraries lapack not found in ['/usr/local/lib', '/usr/lib']
  NOT AVAILABLE

/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/system_info.py:636: UserWarning:
    Lapack (http://www.netlib.org/lapack/) libraries not found.
    Directories to search for the libraries can be specified in the
    numpy/distutils/site.cfg file (section [lapack]) or by setting
    the LAPACK environment variable.
  self.calc_info()
lapack_src_info:
  NOT AVAILABLE

/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/system_info.py:636: UserWarning:
    Lapack (http://www.netlib.org/lapack/) sources not found.
    Directories to search for the sources can be specified in the
    numpy/distutils/site.cfg file (section [lapack_src]) or by setting
    the LAPACK_SRC environment variable.
  self.calc_info()
  NOT AVAILABLE

/usr/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'define_macros'
  warnings.warn(msg)
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
creating build
creating build/src.linux-x86_64-3.6
creating build/src.linux-x86_64-3.6/numpy
creating build/src.linux-x86_64-3.6/numpy/distutils
building library "npymath" sources
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgfortran
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize NAGFCompiler
customize VastFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize GnuFCompiler
Could not locate executable g77
customize G95FCompiler
Could not locate executable g95
customize PathScaleFCompiler
Could not locate executable pathf95
customize NAGFORCompiler
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
C compiler: gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -Os -fomit-frame-pointer -g -Os -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -fPIC

compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python3.6m -c'
gcc: _configtest.c
failure.
removing: _configtest.c _configtest.o
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/tmp/pip-install-x49g_zjw/numpy/setup.py", line 415, in <module>
    setup_package()
  File "/tmp/pip-install-x49g_zjw/numpy/setup.py", line 407, in setup_package
    setup(**metadata)
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/core.py", line 171, in setup
    return old_setup(**new_attr)
  File "/usr/lib/python3.6/site-packages/setuptools/__init__.py", line 129, in setup
    return distutils.core.setup(**attrs)
  File "/usr/lib/python3.6/distutils/core.py", line 148, in setup
    dist.run_commands()
  File "/usr/lib/python3.6/distutils/dist.py", line 955, in run_commands
    self.run_command(cmd)
  File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
    cmd_obj.run()
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/install.py", line 62, in run
    r = self.setuptools_run()
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/install.py", line 36, in setuptools_run
    return distutils_install.run(self)
  File "/usr/lib/python3.6/distutils/command/install.py", line 545, in run
    self.run_command('build')
  File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
    self.distribution.run_command(command)
  File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
    cmd_obj.run()
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/build.py", line 47, in run
    old_build.run(self)
  File "/usr/lib/python3.6/distutils/command/build.py", line 135, in run
    self.run_command(cmd_name)
  File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
    self.distribution.run_command(command)
  File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
    cmd_obj.run()
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/build_src.py", line 148, in run
    self.build_sources()
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/build_src.py", line 159, in build_sources
    self.build_library_sources(*libname_info)
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/build_src.py", line 292, in build_library_sources
    sources = self.generate_sources(sources, (lib_name, build_info))
  File "/tmp/pip-install-x49g_zjw/numpy/numpy/distutils/command/build_src.py", line 375, in generate_sources
    source = func(extension, build_dir)
  File "numpy/core/setup.py", line 667, in get_mathlib_info
    raise RuntimeError("Broken toolchain: cannot link a simple C program")
RuntimeError: Broken toolchain: cannot link a simple C program

----------------------------------------

Command "/usr/bin/python3.6 -u -c "import setuptools, tokenize;file='/tmp/pip-install-x49g_zjw/numpy/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /tmp/pip-record-knl237st/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-x49g_zjw/numpy/