pip install doesn't work python 3.11

sofeasible commented 1 year ago

Hi, I'm working with Evan and David and having an issue where the pip install isn't working with python 3.11.3 (see below). Thank you!

% python --version Python 3.11.3 % pip install mavenn --upgrade Collecting mavenn Using cached mavenn-1.0.2-py2.py3-none-any.whl (15.4 MB) Collecting numpy<=1.23.5 (from mavenn) Downloading numpy-1.23.5-cp311-cp311-macosx_11_0_arm64.whl (13.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 13.3/13.3 MB 13.9 MB/s eta 0:00:00 Collecting matplotlib>=3.2.0 (from mavenn) Downloading matplotlib-3.7.1-cp311-cp311-macosx_11_0_arm64.whl (7.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.3/7.3 MB 17.1 MB/s eta 0:00:00 Collecting pandas>=1.3.0 (from mavenn) Downloading pandas-2.0.2-cp311-cp311-macosx_11_0_arm64.whl (10.7 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.7/10.7 MB 21.5 MB/s eta 0:00:00 INFO: pip is looking at multiple versions of mavenn to determine which version is compatible with other requirements. This could take a while. Collecting mavenn Using cached mavenn-1.0.1-py2.py3-none-any.whl (15.4 MB) Collecting numpy (from mavenn) Downloading numpy-1.24.3-cp311-cp311-macosx_11_0_arm64.whl (13.8 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 13.8/13.8 MB 22.8 MB/s eta 0:00:00 Collecting mavenn Using cached mavenn-1.0.0-py2.py3-none-any.whl (15.4 MB) Using cached mavenn-0.99-py2.py3-none-any.whl (15.4 MB) Using cached mavenn-0.25-py2.py3-none-any.whl (51.1 MB) Using cached mavenn-0.24-py2.py3-none-any.whl (41.7 MB) Using cached mavenn-0.23-py2.py3-none-any.whl (41.1 MB) Using cached mavenn-0.22-py2.py3-none-any.whl (32.3 MB) INFO: pip is looking at multiple versions of mavenn to determine which version is compatible with other requirements. This could take a while. Using cached mavenn-0.21-py2.py3-none-any.whl (30.5 MB) Collecting tensorflow (from mavenn) Downloading tensorflow-2.13.0rc1-cp311-cp311-macosx_12_0_arm64.whl (2.0 kB) Collecting sklearn (from mavenn) Using cached sklearn-0.0.post5.tar.gz (3.7 kB) Preparing metadata (setup.py) ... error error: subprocess-exited-with-error × python setup.py egg_info did not run successfully. │ exit code: 1 ╰─> [18 lines of output] The 'sklearn' PyPI package is deprecated, use 'scikit-learn' rather than 'sklearn' for pip commands. Here is how to fix this error in the main use cases:

use 'pip install scikit-learn' rather than 'pip install sklearn'
replace 'sklearn' by 'scikit-learn' in your pip requirements files (requirements.txt, setup.py, setup.cfg, Pipfile, etc ...)
if the 'sklearn' package is used by one of your dependencies, it would be great if you take some time to track which package uses 'sklearn' instead of 'scikit-learn' and report it to their issue tracker
as a last resort, set the environment variable SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL=True to avoid this error More information is available at https://github.com/scikit-learn/sklearn-pypi-package If the previous advice does not cover your use case, feel free to report it at https://github.com/scikit-learn/sklearn-pypi-package/issues/new [end of output] note: This error originates from a subprocess, and is likely not a problem with pip. error: metadata-generation-failed × Encountered error while generating package metadata. ╰─> See above for output. note: This is an issue with the package mentioned above, not pip. hint: See above for details.

atareen commented 1 year ago

Hello, thanks.

I'll try to reproduce this issue with Python 3.11 shortly. Did you try this install (with the --upgrade) in your base conda environment or (or a site wide install on your local machine) or did you try this in a new conda environment or another virtual env? Can you also please paste a list of your installed packages by running pip list?

Thanks, Ammar

sofeasible commented 1 year ago

Hi Ammar,

I tried in a new conda environment made for mavenn. I actually just reinstalled anaconda because of python interpreter errors, so installed packages are:

Package Version

pip 23.1.2 setuptools 67.8.0 wheel 0.38.4

Cheers, Sophie

atareen commented 1 year ago

Hello, thanks. I meant what packages got installed after you ran pip install mavenn in the new conda env.

sofeasible commented 1 year ago

Yep, that's all that's in that environment (plus base).

atareen commented 1 year ago

Logging note: I met briefly with Sophie and got mavenn working on her machine. mavenn demo and tests are working/passing.

Note that in a new conda environment the following two commands need to be run: pip install mavenn pip install mavenn --upgrade

I will update this in the online documentation shortly.

jbkinney / mavenn

pip install doesn't work python 3.11 #31