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jbloomlab / SARS-CoV-2-RBD_DMS

Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
BSD 3-Clause "New" or "Revised" License
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Update structural annotation #30

Closed tylernstarr closed 4 years ago

tylernstarr commented 4 years ago

Added to the R script that annotates structural features. This adds a column to our structural annotations data file that indicates whether a site makes contacts to the rest of Spike in the down RBD protomer conformations

tylernstarr commented 4 years ago

(Looks like I messed up my own understanding of git branches! I had previously committed changes on the Snakefile and tobit_regressions_binding.Rmd files on a different branch, where I thought they would be stored until I went back to that branch to continue work toward a PR. I then switched to this branch and made the changes to the three files related to this structural annotation. But I guess both commits got PR'ed with this...)

tylernstarr commented 4 years ago

Ok. I think I knew that with respect to the files themselves, but I thought the commits would stay with the branch on which they were committed