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jbloomlab / SARS-CoV-2-RBD_DMS

Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
BSD 3-Clause "New" or "Revised" License
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Structure function #40

Closed tylernstarr closed 4 years ago

tylernstarr commented 4 years ago

I integrated in my preliminary structure-function analysis notebook into the pipeline. The analyses and figures in this notebook certainly aren't final, but at least the skeleton of the main things I want to look at in this analysis are here, and I wanted to integrate while I move on to some preliminary analyses of the other analysis components including Ab epitopes, circulating variants, and natural diversity

tylernstarr commented 4 years ago

(I believe the conflicts emerge in the global epistasis notebooks solely because mine re-ran (finally percolated through the elimination of the Kd column from earlier), and so my exact times for computation differ from yours in the notebook)