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jbloomlab / dms_tools2

software for the analysis and visualization of deep mutational scanning data
GNU General Public License v3.0
29 stars 20 forks source link

make compatible with python 3.7 #31

Closed jbloom closed 4 years ago

jbloom commented 4 years ago

Use more recent versions of pystan, scipy, and statsmodels.

Note also that pystan indexing has changed: https://discourse.mc-stan.org/t/pystan-announcement-one-based-indexing-for-the-names-flatnames/3339