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jbloomlab
/
dms_tools2
software for the analysis and visualization of deep mutational scanning data
GNU General Public License v3.0
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added `diffsel.beta_diversity` function
#22
jbloom
closed
4 years ago
0
relax `pysam` version requirement
#21
jbloom
closed
4 years ago
0
Allow non-int `--letterheight` for `dms2_logoplot`
#20
jbloom
closed
5 years ago
0
Add single-color logoplots for `dms2_logoplot`
#19
jbloom
closed
5 years ago
0
Made sample names a category to preserve order in plot.CodonMutTypes
#18
ajgreaney
closed
5 years ago
4
Add barcodeInfoToCodonVariantTable function and tests
#17
caelanradford
closed
5 years ago
0
`func_score_to_gpm` works with scores for amino acid variants
#16
caelanradford
closed
5 years ago
6
Add functions for converting barcode info files into codon variant tables
#15
caelanradford
closed
5 years ago
1
Update plot functions to handle large facet plots
#14
juhyelee
closed
5 years ago
0
Add codonSubsToSeq and func_score_to_gpm to codonvarianttable.py
#13
caelanradford
closed
5 years ago
2
Frequency of single mutations appears to be out of all variants: plotMutFreqs
#12
caelanradford
closed
5 years ago
2
python3.6 is now required, docs say 3.5
#11
serine
closed
5 years ago
1
MCMC not converging when running dms2_batch_prefs
#10
jiroop
closed
5 years ago
5
color amino acids by frequency in nature?
#9
jbloom
closed
5 years ago
1
Data without barcode
#8
edusoto
closed
5 years ago
1
Request to allow different length barcodes (including 0 length)
#7
AtanasDRadkov
closed
6 years ago
1
Quick bug fix for disulfide bonds
#6
nlubock
closed
6 years ago
1
logoplots made using `dms2_logoplot` are missing legends for overlays
#5
Haddox
closed
6 years ago
7
AttributeError: module 'jupyter' has no attribute '__version__' when running dms2_batch_bcsubamp
#4
yqsoh
closed
6 years ago
1
sites not ordered correctly in `dms2_batch_prefs` average preferences file
#3
Haddox
closed
6 years ago
1
mask site in `dms2_bcsubamp`
#2
Haddox
closed
6 years ago
1
print a better error message when `dms2_batch_bcsubamp` fails
#1
jbloom
closed
6 years ago
1
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