jbloomlab / dms_variants

Analyze deep mutational scanning of barcoded variants.
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get mutational effects and preferences with more options #29

Closed jbloom closed 4 years ago

jbloom commented 4 years ago

This pull request improves the ability to get information from epistasis models summarizing the effects of individual mutations.

There is now a method (AbstractEpistasis.single_mut_effects) to easily get the effects of all mutations on latent or observed phenotype.

In addition, AbstractEpistasis.preferences now has more options such as tidy return format and stringency re-scaling.

This will be version 0.4.5.