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jbloomlab / dms_variants

Analyze deep mutational scanning of barcoded variants.
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estimate pre- to post-selection bottlenecks #34

Closed jbloom closed 4 years ago

jbloom commented 4 years ago

Added the bottlenecks module, which includes a function to estimate pre- and post-selection bottlenecks. It is useful in conjunction with the BottleneckLikelihood epistasis models.

Then updated notebooks and other docs to use / refer to it.