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jbrowsetix / jbrowse

jbrowse non-fork to test tix migration
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write an adaptor allowing Bio::Graphics to produce image tracks #13

Open jbrowsetix opened 13 years ago

jbrowsetix commented 13 years ago

with the TiledImage and other infrastructure we have, it doesn’t seem like this would be too hard.

it would be a huge boon in terms of the diversity of visual representations we could include. GBrowse glyphs are under active development.

for example just in this last year, newly-developed GBrowse tracks included multiple alignments, whiskerplots, XY scatterplots, ternary plots, geographic popup windows (OK this is Javascript but still... might be possible to convert this too)

related to tickets 26, 15, 7 (might make them all a lot easier, or motivate them)

original LH ticket

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jbrowsetix commented 13 years ago

write an adaptor allowing Bio::Graphics to produce image tracks

I believe this ticket is resolved by Ian’s ImageTrackRenderer.

by Mitch

jbrowsetix commented 13 years ago

write an adaptor allowing Bio::Graphics to produce image tracks

not totally resolved - ImageTrackRenderer allows custom tracks via a GD-like API, but does not quite smoothly plug into Bio::Graphics

by Ian Holmes