jbudis / dante

Alignment-free method for genotyping and characterizing STR alleles
Apache License 2.0
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Reader into thread #2

Open marcelTBI opened 5 years ago

marcelTBI commented 5 years ago

Put the processing of the reader inside the thread - this would speed up Dante mainly with high number of available threads, since the reading of the file and creating internal objects from reads take too much time and this is not threaded. This enhancement would be time consuming to make right.