jburnette / MITE-Hunter

target.iplantcollaborative.org/mite_hunter.html
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MITE_HunterIDTE_PHI.pl No such file or directory #5

Open emmannaemeka opened 4 years ago

emmannaemeka commented 4 years ago

Hello, I have been having this issue with MITE-HUNTER

[formatdb] WARNING: Sequence number 43 (lcl|43_mucuna_raw_NC_0), 2 illegal characters were removed: 1 E, 1 P

Reading data... Reading data... Reading data... Reading data... Reading data... Reading data... Reading data... Loading blast output ... mucuna_11_65685 BLAST... Searching for homologs by PHI ... Find homologs... Can't open perl script "/home/emmanuel/MITE_HunterIDTE_PHI.pl": No such file or directory mucuna_21_38560 BLAST... Searching for homologs by PHI ... Find homologs... Can't open perl script "/home/emmanuel/MITE_HunterIDTE_PHI.pl": No such file or directory mucuna_5_1748 BLAST... Searching for homologs by PHI ... Find homologs... Can't open perl script "/home/emmanuel/MITE_HunterIDTE_PHI.pl": No such file or directory mucuna_1_91551 BLAST... Searching for homologs by PHI ... Find homologs... Can't open perl script "/home/emmanuel/MITE_HunterIDTE_PHI.pl": No such file or directory mucuna_31_91525 BLAST... Searching for homologs by PHI ... Find homologs... Can't open perl script "/home/emmanuel/MITE_HunterIDTE_PHI.pl": No such file or directory mucuna_13_378 BLAST... Searching for homologs by PHI ... Find homologs... Can't open perl script "/home/emmanuel/MITE_HunterIDTE_PHI.pl": No such file or directory

I have IDTE_PHI.pl but why i can't find it is a problem.

However I noticed that after installing I had to manually edit the manger.pl file the relative paths to the scripts appears "/home/emmanuel/MITE_HunterIDTE_PHI.pl" but I could not find where this is in the manger.pl file to change it to "/home/emmanuel/MITE_Hunter/IDTE_PHI.pl"

Can you help?