jcastib / opensage

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Heritability Estimates for Binary Traits #8

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago
I can successfully run heretability estimates for continuous traits, but when I 
try it for a binary trait I get the following error:

%ASSOC-E: Likelihood for model 'Baseline' not finite.  Check for outliers
          and/or reduce the number of parameters to be estimated.  Skipping
          model ...

There are no outliers and I am only adjusting for age and gender. I have a 
sample of 6551 participants (542 families), where 669 participants (30 
families) have a one for the binary trait.

I'm using S.A.G.E. 6.3 on windows.

Thank you!

Original issue reported on code.google.com by MeganMar...@gmail.com on 25 Feb 2015 at 5:27