jclachance / BOFdat

Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data
Other
26 stars 6 forks source link

Small technicalities #2

Closed yseif closed 6 years ago

yseif commented 7 years ago

1 - What do you mean by "metabolites" when you say macromolecules supported? 2 - Organism GenBank annotation, format = genbank, .gb,.gbff (any format supported by BioPython) -> you'll probably run into some issues with that. You should be more specific because sometimes the feature.qualifiers will pull out different keys.

jclachance commented 6 years ago

I will address those soon. Thx.

jclachance commented 6 years ago

The new documentation should solve these issues.