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jcrozum / pystablemotifs

Python library for attractor identification and control in Boolean networks
MIT License
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Implement DOI #55

Closed jcrozum closed 3 years ago

jcrozum commented 3 years ago

A DOI function can be implemented by

  1. Calculating the LDOI and reducing the primes by this LDOI
  2. Adding the seed nodes that are not in the LDOI as sinks in the reduced network
  3. Finding the attractor repertoire of this modified network
  4. Determining which node values are shared by all attractors in the reduction
  5. Adding these common node values to the LDOI to get the DOI
jcrozum commented 3 years ago

Implemented in #66