jcrozum / pystablemotifs

Python library for attractor identification and control in Boolean networks

MIT License

28 stars 7 forks source link

Implement doi #65

Closed kyuhyongpark closed 3 years ago

kyuhyongpark commented 3 years ago

55

Added new function domain_of_influence in the DomainOfInfluence folder. It takes primes and fixed set as parameters and returns:

Domain of influence
Contradiction boundary
Nodes that are possibly in the domain of influence
Nodes that are possibly in the contradiction boundary
Attractor repertoire for the reduced network

Added DomainOfInfluenceTesting.py in the Testing folder. For a given set of Boolean rules, it can find:

Domain of influence for all possible source set of wanted size
Difference between LDOI and the DOI
Difference between DOIs of the GAU and the MBPN update

kyuhyongpark commented 3 years ago

I tried manually resolving the conflicts.