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jdblischak / centralized-tiledb-nightlies

Centralized nightly builds of TileDB stack
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The centralized nightlies job failed on Wednesday (2024-04-10) #1

Closed github-actions[bot] closed 5 months ago

github-actions[bot] commented 5 months ago

The centralized nightlies job failed on Wednesday (2024-04-10) in run 8640486128

jdblischak commented 5 months ago

The error was from the TileDB-SOMA-R tests

[ FAIL 2 | WARN 0 | SKIP 0 | PASS 3006 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-SCEOutgest.R:138:3'): Load SCE object from ExperimentQuery mechanics ──
Expected `obj <- query$to_single_cell_experiment(obsm_layers = c(UMAP = "X_umap"))` to run without any conditions.
ℹ Actually got a <simpleError> with text:
  nanoarrow_schema() is an external pointer to NULL
── Failure ('test-SCEOutgest.R:139:3'): Load SCE object from ExperimentQuery mechanics ──
SingleCellExperiment::reducedDimNames(obj) not identical to "UMAP".
Lengths differ: 0 is not 1

[ FAIL 2 | WARN 0 | SKIP 0 | PASS 3006 ]
Error: Test failures
Execution halted
jdblischak commented 5 months ago

The tests passed on the second attempt. Closing

jdblischak commented 5 months ago

@eddelbuettel @mojaveazure just a heads up that I observed these spurious test failures for TileDB-SOMA-R in the most recent nightly build