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jdidion / atropos

An NGS read trimming tool that is specific, sensitive, and speedy. (production)
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Known adapter detector not detecting known adapters #35

Closed jdidion closed 7 years ago

jdidion commented 7 years ago

In the 'detect' command, the 'known' detector (-d known) is not identifying known adapters. The KnownDetector._find_contaminants method is using the wrong calculation to determine the match_frac (currently it's calculating abundance).

jdidion commented 7 years ago

Fixed by 6d4b530