jdwinkler / resistome_generator

Development repo for the Resistome database and its tooling.
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Add in STRINGs interaction data #12

Closed jdwinkler closed 3 years ago

jdwinkler commented 3 years ago

STRINGs maintains the main interaction database for protein-protein data. They have calls for various E. coli strains including MG1655 and BL21; it would be easy to add the data to our interaction table given that they use bnumbers for their nodes.

See here: https://string-db.org/cgi/about?footer_active_subpage=content

jdwinkler commented 3 years ago

Addressed by #14